Publications

2006

Latest Pubmed publication list

Kiemeney LA, Kuiper RP, Pfundt R, van Reijmersdal S, Schoenberg MP, Aben KK, Niermeijer MF, Witjes JA, Schoenmakers EF. No evidence for large-scale germline genomic aberrations in hereditary bladder cancer patients with high-resolution array-based comparative genomic hybridization. Cancer Epidemiol Biomarkers Prev. 15;1:180-3 (2006). Pubmed-link

Kleefstra T, Koolen DA, Nillesen WM, de Leeuw N, Hamel BC, Veltman JA, Sistermans EA, van Bokhoven H, van Ravenswaay C, de Vries BB. Interstitial 2.2 Mb deletion at 9q34 in a patient with mental retardation but without classical features of the 9q subtelomeric deletion syndrome. Am J Med Genet A. 15;140(6):618-23 (2006). Pubmed-link

Looijenga LH, Hersmus R, Gillis AJ, Pfundt R, Stoop HJ, van Gurp RJ, Veltman JA, Beverloo HB, van Drunen E, Geurts van Kessel A, Pera RR, Schneider DT, Summersgill B, Shipley J, McIntyre A, van der Spek P, Schoenmakers E, Oosterhuis JW. Genomic and expression profiling of human spermatocytic seminomas: primary spermatocyte as tumorigenic precursor and DMRT1 as candidate chromosome 9 gene. Cancer Res. 1;66(1):290-302 (2006). Pubmed-link

2005

Veltman et al. Identification of recurrent chromosomal aberrations in germ cell tumors of neonates and infants using genomewide array-based comparative genomic hybridization. Genes, Chromosomes and Cancer: 43: 367-376 (2005). Pubmed-link

Vissers LE, Veltman JA, Geurts van Kessel A, Brunner HG. Identification of disease genes by whole genome CGH arrays. Human Molecular Genetics, 15;14 Spec No. 2:R215-23 (2005). Pubmed-link

de Vries BB, Pfundt R, Leisink M, Koolen DA, Vissers LE, Janssen IM, Reijmersdal S, Nillesen WM, Huys EH, Leeuw N, Smeets D, Sistermans EA, Feuth T, van Ravenswaaij-Arts CM, Geurts van Kessel A, Schoenmakers EF, Brunner HG, Veltman JA. Diagnostic genome profiling in mental retardation. American Journal of Human Genetics, 77(4):606-16. Epub 2005 Aug 30. (2005) Pubmed-link

Jongmans M, Admiraal R, van der Donk K, Vissers L, Baas A, Kapusta L, van Hagen JM, Donnai D, de Ravel T, Veltman J, Geurts van Kessel A, de Vries B, Brunner H, Hoefsloot L, van Ravenswaaij C. CHARGE syndrome: the phenotypic spectrum of mutations in the CHD7 gene. Journal of Medical Genetics, Sep 16; [Epub ahead of print] (2005) Pubmed-link

Veltman JA and Vissers LELM. Molecular karyotyping by means of array CGH; Linking gene dosage alterations to disease phenotypes. In: DNA Microarrays. Ed. Ulrike Nuber, in press.

Magnani I, Ramoni RF, Roversi G, Beghini A, Pfundt R, Schoenmakers EF, Larizza L. Identification of oligodendroglioma specific chromosomal copy number changes in glioblastoma MI-4 cell line by array-CGH and FISH analyses. Cancer Genet Cytogenet, 161(2):140-145 (2005) Pubmed-link

Pfundt R, Smit F, Jansen C, Aalders T, Straatman H, van der Vliet W, Geurts van Kessel A, Schalken J. Identification of androgen-responsive genes that are alternatively regulated in androgen-dependent and androgen-independent rat prostate tumors. Genes Chromosomes Cancer, 43(3):273-283 (2005) Pubmed-link

Koolen DA, Reardon W, Rosser EM, Lacombe D, Hurst JA, Law CJ, Bongers EM, van Ravenswaaij-Arts CM, Leisink MA, Geurts van Kessel A, Veltman JA, de Vries BB. Molecular characterisation of patients with subtelomeric 22q abnormalities using chromosome specific array-based comparative genomic hybridisation. Eur J Hum Genet. 2005 Jun 29; [Epub ahead of print] Pubmed-link

Schraders M, Pfundt R, Straatman HM, Jansen IM, Geurts van Kessel A, Schoenmakers EF, van Krieken JH, Groenen PJ. Novel chromosomal imbalances in mantle cell lymphoma detected by genome-wide array-based comparative genomic hybridization Blood, 105(4):1686-1693 (2005) Pubmed-link

Heidenblad M, Lindgren D, Veltman JA, Jonson T, Mahlamaki EH, Gorunova L, Geurts van Kessel A, Schoenmakers EF, Hoglund M. Microarray analyses reveal strong influence of DNA copy number alterations on the transcriptional patterns in pancreatic cancer: implications for the interpretation of genomic amplification. Oncogene, 24(10):1794-1801 (2005). Pubmed-link

Koolen DA, Veltman JA, Reneir WO, Droog RP, Geurts van Kessel A, de Vries BB. Chromosome 22q11 deletion and pachygyria characterized by array-based comparative genomic hybridisation. Am J Med Genet, 131(3):322-324 (2005). Pubmed-link

2004

Vissers LE, van Ravenswaaij CM, Admiraal R, Hurst JA, de Vries BB, Janssen IM, van der Vliet WA, Huys EH, de Jong PJ, Hamel BC, Schoenmakers EF, Brunner HG, Veltman JA, Geurts van Kessel A. Mutations in a new member of the chromodomain genefamily cause CHARGE syndrome. Nat Genet, 36(9):955-957 (2004) Pubmed-link

Koolen DA, Vissers LE, Nillisen W, Smeets D, van Ravenswaaij CM, Sistermans EA, Veltman JA, de Vries BD. A novel microdeletion, del (2)(q22.3q23.3) in a mentally retarded patient, detected by array-based comparative genomic hybridization. Clin. Genet, 39: 171-184 (2004) Pubmed-link

Veltman JA, Yntema HG, Lugtenberg D, Arts H, Briault S, Huys EHLPG, Osoegawa K, de Jong P, Brunner HG, Geurts van Kessel A, van Bokhoven H, Schoenmakers EFPM. High resolution profiling of X chromosomal aberrations by array comparative genomic hybridisation. Journal of Medical Genetics, 41(6):425-432 (2004). Pubmed-link

Heidenblad M, Schoenmakers EFPM, Jonson T, Veltman JA, Geurts van Kessel A, Höglund M. Genome-wide array-based comparative genomic hybridization reveals novel patterns of gene copy number alterations in pancreatic carcinomas. Cancer Research (2004). Pubmed-link

Hermans KG, van Alewijk DC, Veltman JA, van Weerden W, Geurts van Kessel A, Trapman J. Loss of a small region around the PTEN locus is a major chromosome 10 alteration in prostate cancer xenografts and cell lines. Genes Chromosomes Cancer, 39: 171-184 (2004) Pubmed-link

2003

Vissers LELM, de Vries BBA, Osoegawa K, Janssen IM, Feuth T, On Choy C, Straatman H, van der Vliet W, Huys EHLPG, van Rijk A, Smeets D, van Ravenswaaij-Arts CMA, Knoers N, van der Burgt I, de Jong PJ, Brunner HG, Geurts van Kessel A, Schoenmakers EFPM, Veltman JA. Array-based comparative genomic hybridization for the genome wide detection of submicroscopic chromosome abnormalities. American Journal of Human Genetics, 73: 1261-1270 (2003) Pubmed-link

Veltman IM, Veltman JA, Arkesteijn G, Janssen IM, Vissers LELM, de Jong PJ, Geurts van Kessel A, Schoenmakers EFPM. Chromosomal breakpoint mapping by arrayCGH using flow sorted chromosomes. Biotechniques, 355: 1066-1070 (2003) Pubmed-link

Zafarana G, Grygalewicz B, Gillis AJM, Vissers LELM, van der Vliet W, van Gurp RJHLM, Debiec-Rychter M, Oosterhuis JW, Geurts van Kessel A, Schoenmakers EFPM, Looijenga LHJ, Veltman JA. 12p-amplicon structure analysis in testicular germ cell tumors of adolescents and adults by array-CGH. Oncogene, 22: 7695-7701 (2003) Pubmed-link

Veltman JA, Fridlyand J, Pejavar S, Olshen AB, Korkola J, DeVries S, Carroll P, Kuo W-L, Pinkel D, Albertson D, Cordon-Cardo C, Jain AN, Waldman FM. Array-based comparative genomic hybridization for genome-wide screening of DNA copy number in bladder tumors. Cancer Research, 63: 2872-2880 (2003)

Veltman JA, Jonkers Y, Nuijten I, Janssen I, Van Der Vliet W, Huys E, Vermeesch J, Van Buggenhout G, Fryns JP, Admiraal R, Terhal P, Lacombe D, Geurts van Kessel A, Smeets D, Schoenmakers EFPM, Van Ravenswaaij-Arts CM. Definition of a Critical Region on Chromosome 18 for Congenital Aural Atresia by ArrayCGH. American Journal of Human Genetics, 72: 1578-1584 (2003) Pubmed-link

Van Der Westhuizen FH, Van Den Heuvel LP, Smeets R, Veltman JA, Pfundt R, Geurts van Kessel A, Ursing BM, Smeitink JA. Human mitochondrial complex I deficiency: investigating transcriptional responses by microarray. Neuropediatrics, 43:14-22 (2003) Pubmed-link

Looijenga LH, Zafarana G, Grygalewicz B, Summersgill B, Debiec-Rychter M, Veltman J, Schoenmakers EFPM, Rodriguez S, Jafer O, Clark J, Geurts van Kessel A, Shipley J, van Gurp RJ, Gillis AJ, Oosterhuis JW. Role of gain of 12p in germ cell tumour development. APMIS 111:161-171 (2003) Pubmed-link

2002

Veltman JA, Schoenmakers EFPM, Eussen BH, Janssen I, Merkx G, van Cleef B, van Ravenswaaij CM, Brunner HG, Smeets D, Geurts van Kessel A. High-throughput analysis of subtelomeric chromosome rearrangements using array-based CGH. American Journal of Human Genetics, 70: 1269-1276 (2002) Pubmed-link

Wilhelm M, Veltman JA, Olshen AB, Jain AN, Moore DH, Presti JC Jr, Kovacs G, Waldman FM. Array based CGH for the differential diagnosis of renal cell cancer. Cancer Research, 62: 957-960 (2002) Pubmed-link